Prescott NP, Mansisidor AR, Bram Y, Lemmon AA, Lim C, Risca VI, Schwartz RE, David Y (2023). A nucleosome switch primes Hepatitis B Virus infection, bioRxiv, doi:10.1101/2023.03.03.531011 Article
Mansisidor AR*, Risca VI* (2022). Chromatin accessibility: methods, mechanisms, and biological insights, Nucleus, 13(1):236-276. Article
Kim DS, Risca VI, Reynolds DL, Chappell J, Rubin AJ, Jung N, Donohue LKH, Lopez-Pajares V, Kathiria A, Shi M, Zhao Z, Deep H, Sharmin M, Rao D, Lin S, Chang HY, Snyder MP, Greenleaf WJ, Kundaje A, & Khavari PA (2021). The dynamic, combinatorial cis-regulatory lexicon of epidermal differentiation, Nature genetics, 53(11), 1564–1576. Article
Bell JC, Jukam D, Teran NA, Risca VI, Smith OK, Johnson WL, Skotheim J, Greenleaf WJ, Straight A (2018). Chromatin-associated RNA sequencing (ChAR-seq) maps genome-wide RNA-to-DNA contacts, eLife, eLife 2018;7:e27024, doi:10.7554/eLife.27024. Article
Díaz-Celis CD*, Risca VI*, Hurtado F, Polka J, Hansen S, Maturana D, Lagos R, Mullins RD, Monasterio O (2017) Bacterial Tubulin A/B Exhibit Polarized Growth, Mixed-Polarity Bundling, and Destabilization by GTP Hydrolysis, Journal of Bacteriology, 199:e00211-17. Article
Chiou SH, Risca VI, Wang G, Yang D, Grüner B, Kathiria AS, Ma R, Vaka D, Chu P, Kozak M, Castellini L, Graves E, Kim G, Mourrain P, Koong A, Giaccia A, Winslow MM (2017) Blimp1 induces transient metastatic heterogeneity in pancreatic cancer. Cancer Discovery, 7:1184-1199. Article
Corces MR, Trevino AE, Hamilton EG, Greenside PG, Sinnott-Armstrong NA, Vesuna S, Satpathy AT, Rubin AJ, Montine KS, Wu B, Kathiria AS, Cho SW, Mumbach MR, Carter AC, Kasowski M, Orloff LA, Risca VI, Kundaje A, Khavari PA, Montine TJ, Greenleaf WJ, Chang HY (2017) Improved ATAC-seq for chromatin accessibility in frozen archival human tissues with sub-millimeter resolution. Nature Methods, 14:959-62. Article
Risca VI, Denny SK, Straight AF, Greenleaf WJ (2017) Variable chromatin structure revealed by in situ spatially correlated DNA cleavage mapping. Nature, 541:237–241. Article
Risca VI, Greenleaf WJ (2015) Beyond the linear genome: Paired-end sequencing as a biophysical tool. Trends in Cell Biology, 25:716-719. Review
Risca VI, Greenleaf WJ (2015) Unraveling the 3D genome: genomics tools for multi-scale exploration. Trends in Genetics, 31:357-372. Review
Chiou SH, Kim-Kiselak C, Risca, VI, Heimann MK, Chuang CH, Burds AA, Greenleaf WJ, Jacks TE, Feldser DM, Winslow MM (2014). A conditional system to specifically link disruption of protein-coding function with reporter expression in mice. Cell Reports, 7:2078-2086. Article
Reed SC, Lamason RL, Risca VI, Abernathy E, Welch MD (2014). Rickettsia actin-based motility occurs in distinct phases mediated by different actin nucleators. Current Biology, 24:98-103. Article
Risca VI, Wang EB, Chaudhuri O, Chia JJ, Geissler PL, Fletcher DA (2012). Actin filament curvature biases branching direction. Proceedings of the National Academy of Sciences of the United States of America, 109:2913-2918. Article
Featured in News and Views by Carlsson AE (2012), Nature Physics, 8:259-260.
Dayel MJ, Akin O, Landeryou M, Risca V, Mogilner A, Mullins RD (2009). In silico reconstruction of actin-based symmetry breaking and motility. PLoS Biology, 7:e1000201. Article
Clelland CT, Risca VI, Bancroft FC (1999). Hiding messages in DNA microdots. Nature, 399:533-534. Article
*Co-first authors.